zoosporic holozoa vs dikarya: functional enrichment (novelty)
One-sided hypergeometric test per term; Benjamini-Hochberg FDR within each scope, level and vocabulary. Candidates are the novelty candidates: gene families present in the IN group and absent from the OUT group. Universe: proteome. Background clustered: True (318843 sequences in 182816 clusters, mmseqs easy-cluster --min-seq-id 0.3 -c 0.8). Family level: one unit per candidate family and per background cluster.
Sources: Pfam: 2026-01-27-Pfam38.2; InterPro entries: 110.0; GO: releases/2026-07-26; analysis generated 2026-10-12T14:56:47. Source tables: studies/eukaryotes/zoosporic_holozoa_vs_dikarya/analysis/enrichment/outputs/proteome_clustered.
Full record: PROVENANCE. Run report: report.html.
- Annotation provenance is not fully recorded: PROVENANCE.yaml lists the per-species annotation files and their checksums, but not the UniProt release they come from.
- GO results are secondary. GO annotations include computational evidence (IEA, IBA); the GO evidence column shows if a term has non-IEA support.
- Candidate families (pipeline clustering of candidates) and background clusters (mmseqs clustering of the background proteome) are made by different runs, so family-level counts are not fully comparable.
- GO covers only 24 of 25 species: Monobrev, Salprose, Capsowcz, Sphaarct, Amphquee, Tricadha, Nemavect, Caeneleg, Drosmela, Homosapi, Batrdend, Batrsala, Spizpunc, Powehirt, Geravari, Syncendo, Syncmicr, Chytconf, Polystew, Rhizglob, Rhizrose, Cateangu, Allomacr, Pirofinn. No GO annotation for Mnemleid; this species adds no units to the GO tests, so those results describe the covered species only.
Summary figure
Annotation coverage
Fraction of proteins with at least one term per vocabulary. Universe = all proteins of the species; candidates = the candidate set.
| Species | Set | Proteins | Pfam | Pfam clan | InterPro | GO | Any |
|---|---|---|---|---|---|---|---|
| Monobrev | universe | 9156 | 73.2% | 63.4% | 82.1% | 68.4% | 83.1% |
| Monobrev | candidates | 196 | 93.4% | 65.8% | 99.5% | 89.3% | 99.5% |
| Salprose | universe | 11614 | 70.3% | 59.8% | 79.8% | 63.8% | 80.6% |
| Salprose | candidates | 237 | 92.0% | 64.6% | 98.3% | 88.6% | 98.7% |
| Capsowcz | universe | 8738 | 79.0% | 66.2% | 83.8% | 71.4% | 84.1% |
| Capsowcz | candidates | 125 | 96.0% | 74.4% | 100.0% | 92.0% | 100.0% |
| Sphaarct | universe | 18207 | 44.2% | 36.5% | 53.6% | 40.7% | 54.0% |
| Sphaarct | candidates | 127 | 86.6% | 66.1% | 97.6% | 83.5% | 97.6% |
| Amphquee | universe | 20174 | 73.0% | 63.1% | 83.0% | 64.0% | 83.3% |
| Amphquee | candidates | 383 | 91.4% | 66.8% | 99.2% | 88.0% | 99.5% |
| Tricadha | universe | 11518 | 84.1% | 70.4% | 89.9% | 77.1% | 90.4% |
| Tricadha | candidates | 303 | 94.1% | 69.3% | 99.0% | 87.1% | 99.3% |
| Nemavect | universe | 24428 | 73.5% | 62.6% | 80.4% | 63.6% | 81.0% |
| Nemavect | candidates | 413 | 94.7% | 68.5% | 99.5% | 84.3% | 99.8% |
| Mnemleid | universe | 19289 | 63.5% | 55.6% | 72.8% | 0.0% | 72.8% |
| Mnemleid | candidates | 269 | 96.3% | 66.2% | 99.6% | 0.0% | 99.6% |
| Caeneleg | universe | 19792 | 71.0% | 57.4% | 76.1% | 58.6% | 77.8% |
| Caeneleg | candidates | 148 | 98.0% | 79.0% | 100.0% | 96.0% | 100.0% |
| Drosmela | universe | 13814 | 80.4% | 63.1% | 84.4% | 74.7% | 87.0% |
| Drosmela | candidates | 210 | 97.1% | 71.0% | 100.0% | 90.5% | 100.0% |
| Homosapi | universe | 20652 | 94.4% | 75.1% | 96.4% | 93.8% | 97.4% |
| Homosapi | candidates | 373 | 97.0% | 70.8% | 99.5% | 98.9% | 100.0% |
| Batrdend | universe | 8610 | 68.0% | 55.5% | 75.5% | 64.4% | 75.9% |
| Batrdend | candidates | 258 | 91.9% | 66.7% | 98.8% | 83.0% | 98.8% |
| Batrsala | universe | 11060 | 60.0% | 49.6% | 66.2% | 53.6% | 66.6% |
| Batrsala | candidates | 281 | 94.0% | 64.8% | 99.6% | 83.3% | 99.6% |
| Spizpunc | universe | 8940 | 77.0% | 62.6% | 81.7% | 68.6% | 82.1% |
| Spizpunc | candidates | 302 | 97.0% | 66.2% | 99.3% | 81.8% | 99.7% |
| Powehirt | universe | 6533 | 88.3% | 72.6% | 92.2% | 79.7% | 92.5% |
| Powehirt | candidates | 265 | 94.3% | 64.5% | 99.6% | 81.5% | 99.6% |
| Geravari | universe | 8696 | 72.9% | 59.8% | 78.6% | 65.8% | 79.0% |
| Geravari | candidates | 272 | 93.8% | 65.1% | 98.9% | 80.5% | 99.3% |
| Syncendo | universe | 7895 | 64.4% | 52.3% | 69.6% | 59.2% | 70.0% |
| Syncendo | candidates | 205 | 93.7% | 62.0% | 99.5% | 82.0% | 99.5% |
| Syncmicr | universe | 6304 | 90.2% | 75.6% | 94.1% | 82.1% | 94.3% |
| Syncmicr | candidates | 237 | 94.1% | 63.7% | 99.6% | 81.0% | 99.6% |
| Chytconf | universe | 10661 | 80.1% | 68.1% | 86.9% | 72.9% | 87.3% |
| Chytconf | candidates | 287 | 93.4% | 65.2% | 99.7% | 81.2% | 99.7% |
| Polystew | universe | 9229 | 72.1% | 60.4% | 80.4% | 63.9% | 80.9% |
| Polystew | candidates | 270 | 95.2% | 65.2% | 99.6% | 84.1% | 99.6% |
| Rhizglob | universe | 16725 | 56.7% | 48.2% | 65.1% | 50.4% | 65.5% |
| Rhizglob | candidates | 292 | 91.8% | 66.1% | 99.0% | 81.5% | 99.3% |
| Rhizrose | universe | 11454 | 62.5% | 51.2% | 70.1% | 55.4% | 70.5% |
| Rhizrose | candidates | 290 | 92.8% | 61.0% | 97.6% | 80.7% | 98.6% |
| Cateangu | universe | 12590 | 48.7% | 39.4% | 55.5% | 44.3% | 55.8% |
| Cateangu | candidates | 240 | 91.2% | 62.5% | 99.2% | 85.0% | 100.0% |
| Allomacr | universe | 18611 | 65.4% | 53.1% | 72.9% | 59.8% | 73.3% |
| Allomacr | candidates | 389 | 91.5% | 64.8% | 99.5% | 86.9% | 99.5% |
| Pirofinn | universe | 10768 | 67.0% | 56.0% | 73.5% | 57.1% | 73.9% |
| Pirofinn | candidates | 243 | 93.8% | 63.0% | 98.8% | 81.9% | 99.2% |
| ALL_IN | universe | 325458 | 70.3% | 58.4% | 77.0% | 60.1% | 77.7% |
| ALL_IN | candidates | 6615 | 93.8% | 66.3% | 99.2% | 81.9% | 99.5% |
Tests summary
Per vocabulary: terms with FDR < 0.05 / terms tested. Protein level counts proteins; family level counts candidate families and background clusters.
| Scope | Level | Cand. units | Pfam sig / tested | Pfam clan sig / tested | InterPro sig / tested | GO sig / tested |
|---|---|---|---|---|---|---|
| whole_set | family | 2958 | 297 / 6027 | 48 / 600 | 564 / 12289 | 532 / 13705 |
| whole_set | protein | 6615 | 388 / 7694 | 72 / 619 | 709 / 16074 | 691 / 15077 |
| Allomacr | family | 265 | 7 / 440 | 8 / 251 | 17 / 1093 | 83 / 2399 |
| Allomacr | protein | 389 | 17 / 787 | 13 / 311 | 40 / 1845 | 132 / 3038 |
| Amphquee | family | 346 | 6 / 661 | 11 / 296 | 35 / 1516 | 134 / 2802 |
| Amphquee | protein | 383 | 12 / 804 | 13 / 325 | 47 / 1828 | 157 / 2991 |
| Batrdend | family | 254 | 1 / 248 | 4 / 200 | 6 / 650 | 67 / 1987 |
| Batrdend | protein | 258 | 2 / 307 | 8 / 215 | 11 / 785 | 74 / 2076 |
| Batrsala | family | 270 | 2 / 272 | 6 / 210 | 8 / 692 | 70 / 1949 |
| Batrsala | protein | 281 | 5 / 330 | 7 / 223 | 17 / 819 | 96 / 2038 |
| Caeneleg | family | 134 | 1 / 513 | 1 / 276 | 3 / 1240 | 62 / 3878 |
| Caeneleg | protein | 148 | 5 / 700 | 9 / 299 | 15 / 1651 | 91 / 4192 |
| Capsowcz | family | 119 | 2 / 364 | 2 / 242 | 5 / 890 | 15 / 2062 |
| Capsowcz | protein | 125 | 3 / 421 | 3 / 253 | 7 / 1020 | 21 / 2145 |
| Cateangu | family | 227 | 2 / 272 | 2 / 202 | 5 / 692 | 89 / 1944 |
| Cateangu | protein | 240 | 4 / 352 | 5 / 219 | 13 / 880 | 94 / 2050 |
| Chytconf | family | 256 | 2 / 396 | 3 / 244 | 9 / 974 | 84 / 2140 |
| Chytconf | protein | 287 | 6 / 590 | 7 / 280 | 12 / 1389 | 92 / 2408 |
| Drosmela | family | 197 | 8 / 529 | 5 / 278 | 16 / 1233 | 115 / 5154 |
| Drosmela | protein | 210 | 10 / 711 | 6 / 308 | 21 / 1635 | 131 / 5424 |
| Geravari | family | 270 | 3 / 317 | 8 / 228 | 9 / 800 | 105 / 2048 |
| Geravari | protein | 272 | 3 / 372 | 8 / 241 | 11 / 928 | 106 / 2142 |
| Homosapi | family | 321 | 12 / 758 | 11 / 334 | 25 / 1702 | 142 / 10060 |
| Homosapi | protein | 373 | 20 / 1326 | 18 / 394 | 55 / 2898 | 261 / 10899 |
| Mnemleid | family | 259 | 2 / 522 | 7 / 266 | 8 / 1197 | 0 / 0 (skipped_no_annotated_candidates) |
| Mnemleid | protein | 269 | 4 / 643 | 11 / 288 | 13 / 1467 | 0 / 0 (skipped_no_annotated_candidates) |
| Monobrev | family | 193 | 2 / 382 | 6 / 221 | 4 / 892 | 66 / 2094 |
| Monobrev | protein | 196 | 3 / 419 | 8 / 228 | 7 / 992 | 67 / 2169 |
| Nemavect | family | 374 | 5 / 745 | 6 / 341 | 21 / 1798 | 121 / 3040 |
| Nemavect | protein | 413 | 14 / 914 | 8 / 370 | 41 / 2214 | 147 / 3294 |
| Pirofinn | family | 233 | 1 / 318 | 4 / 208 | 9 / 788 | 62 / 2191 |
| Pirofinn | protein | 243 | 1 / 404 | 8 / 224 | 9 / 1002 | 86 / 2360 |
| Polystew | family | 260 | 3 / 323 | 6 / 217 | 8 / 810 | 75 / 1986 |
| Polystew | protein | 270 | 6 / 406 | 9 / 235 | 16 / 982 | 95 / 2095 |
| Powehirt | family | 262 | 3 / 308 | 8 / 219 | 6 / 761 | 88 / 1993 |
| Powehirt | protein | 265 | 3 / 358 | 9 / 234 | 6 / 880 | 87 / 2078 |
| Rhizglob | family | 273 | 1 / 444 | 6 / 244 | 15 / 1061 | 82 / 2437 |
| Rhizglob | protein | 292 | 3 / 596 | 8 / 268 | 14 / 1369 | 94 / 2624 |
| Rhizrose | family | 289 | 6 / 369 | 7 / 232 | 6 / 915 | 107 / 2125 |
| Rhizrose | protein | 290 | 6 / 408 | 7 / 244 | 9 / 1016 | 116 / 2194 |
| Salprose | family | 225 | 3 / 476 | 7 / 252 | 5 / 1094 | 83 / 2211 |
| Salprose | protein | 237 | 5 / 523 | 5 / 259 | 10 / 1218 | 84 / 2289 |
| Sphaarct | family | 125 | 1 / 391 | 2 / 237 | 4 / 1014 | 32 / 2246 |
| Sphaarct | protein | 127 | 1 / 440 | 2 / 246 | 4 / 1114 | 32 / 2303 |
| Spizpunc | family | 301 | 4 / 365 | 8 / 232 | 12 / 889 | 86 / 2446 |
| Spizpunc | protein | 302 | 4 / 424 | 8 / 245 | 12 / 1021 | 88 / 2536 |
| Syncendo | family | 203 | 1 / 259 | 5 / 198 | 0 / 649 | 62 / 1870 |
| Syncendo | protein | 205 | 2 / 296 | 7 / 214 | 3 / 735 | 63 / 1923 |
| Syncmicr | family | 236 | 1 / 298 | 7 / 212 | 3 / 750 | 68 / 1942 |
| Syncmicr | protein | 237 | 1 / 364 | 8 / 224 | 6 / 890 | 78 / 2049 |
| Tricadha | family | 263 | 5 / 442 | 6 / 273 | 8 / 1067 | 106 / 2509 |
| Tricadha | protein | 303 | 10 / 574 | 7 / 289 | 19 / 1393 | 123 / 2728 |
Top 25 Pfam terms (whole set, family level)
25 rows shown, ordered by FDR then p-value; 25 have FDR < 0.05 (bold).
| Term | Name | k / N cand. | n / M bg | Fold | FDR (BH) |
|---|---|---|---|---|---|
| PF00211 | Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain | 94 / 2711 | 171 / 107786 | 21.856 | 6.67e-99 |
| PF17958 | EF-hand_13: EF-hand domain | 23 / 2711 | 24 / 107786 | 38.102 | 1.05e-32 |
| PF18027 | Pepdidase_M14_N: Cytosolic carboxypeptidase N-terminal domain | 25 / 2711 | 32 / 107786 | 31.062 | 5.29e-31 |
| PF03133 | TTL: Tubulin-tyrosine ligase family | 37 / 2711 | 108 / 107786 | 13.621 | 1.56e-28 |
| PF07701 | HNOBA: Heme NO binding associated | 20 / 2711 | 27 / 107786 | 29.451 | 8.67e-24 |
| PF03493 | BK_channel_a: Calcium-activated BK potassium channel alpha subunit | 20 / 2711 | 28 / 107786 | 28.399 | 2.47e-23 |
| PF00246 | Peptidase_M14: Zinc carboxypeptidase | 30 / 2711 | 86 / 107786 | 13.869 | 2.51e-23 |
| PF06294 | CH_2: CH-like domain in sperm protein | 21 / 2711 | 36 / 107786 | 23.193 | 6.99e-22 |
| PF00027 | cNMP_binding: Cyclic nucleotide-binding domain | 48 / 2711 | 303 / 107786 | 6.298 | 2.94e-21 |
| PF22614 | Slo-like_RCK: Calcium-activated potassium channel slowpoke-like RCK domain | 20 / 2711 | 34 / 107786 | 23.388 | 5.74e-21 |
| PF20811 | PARG_cat_N: Poly (ADP-ribose) glycohydrolase (PARG), helical domain | 15 / 2711 | 16 / 107786 | 37.274 | 8.41e-21 |
| PF07700 | HNOB: Haem-NO-binding | 14 / 2711 | 14 / 107786 | 39.759 | 1.97e-20 |
| PF05028 | PARG_cat_C: Poly (ADP-ribose) glycohydrolase (PARG), Macro domain fold | 17 / 2711 | 25 / 107786 | 27.036 | 2.54e-19 |
| PF00003 | 7tm_3: 7 transmembrane sweet-taste receptor of 3 GCPR | 51 / 2711 | 385 / 107786 | 5.267 | 2.95e-19 |
| PF30846 | CEP164_N: CEP164 N-terminal domain | 15 / 2711 | 18 / 107786 | 33.132 | 3.00e-19 |
| PF28678 | CXorf58_MFI: CXorf58/MFI domain | 16 / 2711 | 23 / 107786 | 27.658 | 1.92e-18 |
| PF25462 | Beta-barrel_INTS6: INTS6 beta-barrel domain | 13 / 2711 | 14 / 107786 | 36.919 | 7.60e-18 |
| PF26187 | Ig_NPHP4_4th: NPH4 Ig-like domain 4 | 13 / 2711 | 15 / 107786 | 34.458 | 5.26e-17 |
| PF02996 | Prefoldin: Prefoldin subunit | 18 / 2711 | 38 / 107786 | 18.833 | 1.01e-16 |
| PF13870 | CCDC113_CCDC96_CC: CCDC113/CCDC96, coiled-coil | 14 / 2711 | 19 / 107786 | 29.296 | 1.16e-16 |
| PF21773 | ODAD1_CC: ODAD1 central coiled coil region | 14 / 2711 | 19 / 107786 | 29.296 | 1.16e-16 |
| PF23277 | Ig_Dlec1_1: Deleted in lung and esophageal cancer protein 1 Ig domain | 12 / 2711 | 13 / 107786 | 36.7 | 2.18e-16 |
| PF01167 | Tub: Tub family | 14 / 2711 | 20 / 107786 | 27.831 | 3.29e-16 |
| PF08683 | CAMSAP_CKK: Microtubule-binding calmodulin-regulated spectrin-associated | 14 / 2711 | 20 / 107786 | 27.831 | 3.29e-16 |
| PF03607 | DCX: Doublecortin | 19 / 2711 | 47 / 107786 | 16.073 | 3.29e-16 |
Top 25 InterPro terms (whole set, family level)
25 rows shown, ordered by FDR then p-value; 25 have FDR < 0.05 (bold).
| Term | Name | k / N cand. | n / M bg | Fold | FDR (BH) |
|---|---|---|---|---|---|
| IPR001054 | Domain:Adenylyl cyclase class-3/4/guanylyl cyclase | 99 / 2923 | 190 / 123867 | 22.08 | 1.88e-103 |
| IPR029787 | Homologous_superfamily:Nucleotide cyclase | 99 / 2923 | 214 / 123867 | 19.604 | 5.59e-97 |
| IPR018297 | Conserved_site:Adenylyl cyclase class-4/guanylyl cyclase, conserved site | 36 / 2923 | 53 / 123867 | 28.784 | 1.92e-42 |
| IPR050821 | Family:Cytosolic carboxypeptidase | 30 / 2923 | 40 / 123867 | 31.783 | 2.75e-37 |
| IPR041534 | Domain:PP2A regulatory subunit B'', EF-hand domain | 23 / 2923 | 24 / 123867 | 40.611 | 2.00e-33 |
| IPR040626 | Domain:Cytosolic carboxypeptidase, N-terminal | 25 / 2923 | 32 / 123867 | 33.107 | 1.12e-31 |
| IPR011989 | Homologous_superfamily:Armadillo-like helical | 142 / 2923 | 1839 / 123867 | 3.272 | 4.97e-31 |
| IPR004344 | Family:Tubulin-tyrosine ligase/Tubulin polyglutamylase | 37 / 2923 | 108 / 123867 | 14.518 | 1.71e-29 |
| IPR026983 | Family:Dynein heavy chain | 41 / 2923 | 172 / 123867 | 10.101 | 7.47e-26 |
| IPR000834 | Domain:Peptidase M14, carboxypeptidase A | 31 / 2923 | 87 / 123867 | 15.1 | 3.82e-25 |
| IPR011645 | Domain:Haem NO binding associated | 20 / 2923 | 27 / 123867 | 31.39 | 2.28e-24 |
| IPR003929 | Domain:Calcium-activated potassium channel BK, alpha subunit | 20 / 2923 | 28 / 123867 | 30.269 | 7.15e-24 |
| IPR011992 | Homologous_superfamily:EF-hand domain pair | 95 / 2923 | 1108 / 123867 | 3.633 | 1.18e-23 |
| IPR036322 | Homologous_superfamily:WD40-repeat-containing domain superfamily | 144 / 2923 | 2277 / 123867 | 2.68 | 6.02e-23 |
| IPR015943 | Homologous_superfamily:WD40/YVTN repeat-like-containing domain superfamily | 155 / 2923 | 2583 / 123867 | 2.543 | 1.55e-22 |
| IPR010441 | Domain:CH-like domain in sperm protein | 21 / 2923 | 36 / 123867 | 24.72 | 1.92e-22 |
| IPR042463 | Homologous_superfamily:Haem NO binding associated domain superfamily | 15 / 2923 | 15 / 123867 | 42.377 | 2.73e-22 |
| IPR018490 | Homologous_superfamily:Cyclic nucleotide-binding domain superfamily | 53 / 2923 | 382 / 123867 | 5.879 | 4.81e-22 |
| IPR016024 | Homologous_superfamily:Armadillo-type fold | 156 / 2923 | 2649 / 123867 | 2.496 | 5.67e-22 |
| IPR039720 | Family:Transmembrane protein 94 | 17 / 2923 | 21 / 123867 | 34.305 | 7.01e-22 |
| IPR001680 | Repeat:WD40 repeat | 129 / 2923 | 1975 / 123867 | 2.768 | 8.97e-22 |
| IPR003148 | Domain:Regulator of K+ conductance, N-terminal lobe | 20 / 2923 | 34 / 123867 | 24.927 | 1.53e-21 |
| IPR000595 | Domain:Cyclic nucleotide-binding domain | 51 / 2923 | 363 / 123867 | 5.954 | 1.60e-21 |
| IPR007724 | Family:Poly(ADP-ribose) glycohydrolase | 17 / 2923 | 22 / 123867 | 32.746 | 2.51e-21 |
| IPR048362 | Domain:Poly (ADP-ribose) glycohydrolase, helical domain | 15 / 2923 | 16 / 123867 | 39.728 | 2.91e-21 |
Top 15 GO terms (whole set, family level) — secondary, computational evidence (IEA/IBA) included
15 rows shown, ordered by FDR then p-value; 15 have FDR < 0.05 (bold).
| Term | Name | k / N cand. | n / M bg | Fold | FDR (BH) | GO evidence | Families with non-IEA |
|---|---|---|---|---|---|---|---|
| GO:0005929 | cellular_component:cilium | 287 / 2373 | 1192 / 91079 | 9.241 | 7.63e-184 | has_non_IEA | 125 |
| GO:0007017 | biological_process:microtubule-based process | 386 / 2373 | 2863 / 91079 | 5.175 | 1.83e-156 | has_non_IEA | 183 |
| GO:0007018 | biological_process:microtubule-based movement | 271 / 2373 | 1408 / 91079 | 7.387 | 8.10e-147 | has_non_IEA | 127 |
| GO:0005930 | cellular_component:axoneme | 158 / 2373 | 443 / 91079 | 13.689 | 7.56e-129 | has_non_IEA | 74 |
| GO:0044782 | biological_process:cilium organization | 210 / 2373 | 916 / 91079 | 8.799 | 1.07e-128 | has_non_IEA | 115 |
| GO:0120025 | cellular_component:plasma membrane bounded cell projection | 339 / 2373 | 2765 / 91079 | 4.706 | 4.23e-124 | has_non_IEA | 157 |
| GO:0042995 | cellular_component:cell projection | 339 / 2373 | 2772 / 91079 | 4.694 | 7.69e-124 | has_non_IEA | 157 |
| GO:0060271 | biological_process:cilium assembly | 191 / 2373 | 805 / 91079 | 9.107 | 8.82e-120 | has_non_IEA | 105 |
| GO:0120031 | biological_process:plasma membrane bounded cell projection assembly | 199 / 2373 | 895 / 91079 | 8.534 | 3.00e-119 | has_non_IEA | 112 |
| GO:0030031 | biological_process:cell projection assembly | 200 / 2373 | 909 / 91079 | 8.445 | 5.52e-119 | has_non_IEA | 113 |
| GO:0036064 | cellular_component:ciliary basal body | 151 / 2373 | 610 / 91079 | 9.501 | 5.57e-97 | has_non_IEA | 72 |
| GO:0120036 | biological_process:plasma membrane bounded cell projection organization | 228 / 2373 | 1672 / 91079 | 5.234 | 5.68e-91 | has_non_IEA | 130 |
| GO:0005815 | cellular_component:microtubule organizing center | 223 / 2373 | 1724 / 91079 | 4.965 | 2.32e-84 | has_non_IEA | 113 |
| GO:0042073 | biological_process:intraciliary transport | 93 / 2373 | 226 / 91079 | 15.794 | 4.60e-82 | has_non_IEA | 38 |
| GO:0030030 | biological_process:cell projection organization | 230 / 2373 | 1909 / 91079 | 4.624 | 5.23e-81 | has_non_IEA | 132 |
Actin cytoskeleton controls
Known actin-related families and how many of their proteins pass each filter. Protein ID columns are left out.
| control | pfam_ids | desc_regex | IN_universe | IN_in_matrix | IN_pass_ingroup_rule | candidates | near_miss_out1 | near_miss_out2 | n_Monobrev | n_Salprose | n_Capsowcz | n_Sphaarct | n_Amphquee | n_Tricadha | n_Nemavect | n_Mnemleid | n_Caeneleg | n_Drosmela | n_Homosapi | n_Batrdend | n_Batrsala | n_Spizpunc | n_Powehirt | n_Geravari | n_Syncendo | n_Syncmicr | n_Chytconf | n_Polystew | n_Rhizglob | n_Rhizrose | n_Cateangu | n_Allomacr | n_Pirofinn | n_Sacccere | n_Schipomb | n_Neurcras | n_Aspenidu | n_Mycomayd | n_Crypneof | n_Coprcine |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Arp2/3 ARPC2 (P34-Arc) | PF04045 | 26 | 26 | 26 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | |
| Arp2/3 ARPC3 (P21-Arc) | PF04062 | 27 | 27 | 27 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | |
| Arp2/3 ARPC4 | PF05856 | 25 | 25 | 25 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | |
| Arp2/3 ARPC5 (P16-Arc) | PF04699 | 28 | 28 | 24 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | |
| Arp2/3 ARPC1 (description only) | arp2/3 complex.*(41|p41|subunit 1)|ARPC1 | 3 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | |
| Arp2 / Arp3 (description only) | actin-related protein (2|3)\b|\bARP[23]\b | 169 | 169 | 162 | 0 | 0 | 1 | 5 | 6 | 5 | 5 | 6 | 6 | 7 | 6 | 8 | 8 | 11 | 6 | 7 | 6 | 7 | 6 | 7 | 6 | 6 | 8 | 5 | 6 | 7 | 13 | 6 | 7 | 7 | 6 | 7 | 7 | 5 | 5 | |
| WAVE complex NCKAP1 | PF09735 | 25 | 25 | 24 | 22 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| WAVE complex CYFIP (FragX_IP) | PF05994 | 31 | 30 | 27 | 26 | 0 | 0 | 1 | 2 | 1 | 0 | 5 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| WAVE complex ABI | PF07815|PF27594 | 13 | 12 | 7 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 3 | 1 | 1 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| SCAR/WAVE (SCAR_helical) | PF27569 | 27 | 27 | 15 | 15 | 0 | 0 | 1 | 2 | 1 | 0 | 2 | 1 | 1 | 3 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| WASP family (WH1) | PF00568 | 63 | 61 | 19 | 0 | 0 | 2 | 2 | 3 | 3 | 3 | 5 | 5 | 5 | 3 | 2 | 4 | 11 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | |
| WH2 motif (WASP, WAVE, others) | PF02205 | 70 | 58 | 15 | 5 | 0 | 1 | 3 | 6 | 5 | 2 | 4 | 3 | 3 | 4 | 4 | 4 | 15 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 2 | 2 | 2 | 1 | 3 | 2 | 2 | 2 | |
| Formin FH2 | PF02181 | 162 | 158 | 130 | 7 | 9 | 14 | 8 | 8 | 6 | 8 | 12 | 4 | 11 | 8 | 7 | 6 | 15 | 4 | 6 | 4 | 4 | 4 | 3 | 4 | 5 | 6 | 5 | 5 | 3 | 9 | 7 | 2 | 3 | 1 | 1 | 2 | 1 | 2 | |
| Formin Drf_GBD / Drf_FH3 / Drf_DAD | PF06371|PF06367|PF06345 | 115 | 114 | 88 | 5 | 5 | 6 | 5 | 5 | 3 | 5 | 7 | 4 | 9 | 3 | 3 | 5 | 9 | 3 | 4 | 4 | 3 | 4 | 2 | 3 | 3 | 4 | 3 | 7 | 3 | 7 | 7 | 1 | 4 | 2 | 2 | 2 | 2 | 3 | |
| Ena/VASP (VASP_tetra) | PF08776 | 5 | 5 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| Coronin (description only) | coronin | 63 | 63 | 61 | 2 | 0 | 0 | 1 | 1 | 2 | 2 | 2 | 2 | 4 | 2 | 2 | 2 | 7 | 1 | 1 | 3 | 3 | 4 | 1 | 2 | 4 | 2 | 2 | 4 | 1 | 4 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | |
| Cortactin (HS1_rep) | PF02218 | 11 | 11 | 10 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| Myosin 2 tail (Myosin_tail_1) | PF01576 | 63 | 61 | 52 | 0 | 0 | 0 | 1 | 1 | 3 | 1 | 3 | 0 | 2 | 6 | 8 | 4 | 19 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | |
| Myosin head (all myosins) | PF00063 | 377 | 377 | 371 | 0 | 0 | 0 | 32 | 32 | 23 | 15 | 19 | 12 | 20 | 10 | 17 | 14 | 39 | 7 | 8 | 9 | 9 | 7 | 6 | 9 | 13 | 7 | 14 | 12 | 8 | 21 | 14 | 5 | 5 | 4 | 5 | 4 | 4 | 5 |
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