gallery / bacteria / UHM_Akkermansia

UHM Akkermansia

Current result: pairwise-diamond. Other runs are archived versions (other parameters, dates, or pipeline versions).

RunPipelineSummaryParametersPublished
pairwise-diamondcurrentmain.nf14 species--run_tool diamond --cluster_tool pairwise --pfam_hmm /bigdata/stajichlab/jstajich/projects/NovInvenio/db/pfam/38.2/Pfam-A.hmm --swissprot_dmnd /bigdata/stajichlab/jstajich/projects/NovInvenio/db/uniprot/uniprot_sprot.fasta.dmnd --modelorgs_config /bigdata/stajichlab/jstajich/projects/NovInvenio_Investigations/studies/bacteria/UHM_Akkermansia/modelorgs.yaml2026-09-08