Annotation source: Pfam from a HMMER search (no GO/InterPro) for: Protomyces inouyei (Protinou). Other annotated species: UniProt (GO, Pfam, InterPro). For the species above, an empty GO or InterPro field means 'not searched', not 'no annotation'.
Run summary
Loss candidates
Outgroup species
Gene families
Flagged by ingroup TBLASTN
How to read this page
- Loss candidate. An outgroup-sourced protein that has a qualifying hit in at least the stated fraction of the outgroup proteomes and in at most the stated fraction of the ingroup proteomes (default: none). The search runs in the opposite direction to the novelty search.
- Qualifying hit. Passes the E-value cutoff and the paralog-competition filter. "No qualifying hit" in the ingroup is not proof of loss: it may be an annotation gap.
- Ingroup TBLASTN counts ingroup genomes where TBLASTN of the cluster representative found a hit. It is evidence only and does not remove a candidate.
- Ingroup signal (when recorded) is the strongest ingroup evidence by query coverage, including filtered hits: none, domain_only or broad, at an adjustable threshold. Evidence only.